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Software Engineer (Bioinformatics team)

Join our dynamic bioinformatics team as a Software Engineer. You will be responsible for writing, reviewing, and optimizing bioinformatics scripts and pipelines, ensuring efficient data processing. Collaborate closely with bioinformaticians and maintain the modular structure of our codebase. A Bachelor's degree in Computer Science or a related field is required, along with proficiency in Python, Docker, and HTML. Prior knowledge in bioinformatics and proficiency in R are preferred.

Résumé suggéré par Welcome to the Jungle

CDI
Suresnes
Télétravail total
Salaire : Non spécifié
Début : 06 juillet 2025
Expérience : > 2 ans
Missions clés

Write, understand, and review bioinformatics scripts and pipelines, ensuring robust and efficient data processing.

Collaborate closely with bioinformaticians to provide scripting and technical support, refactoring code according to best practice standards.

Review, understand, optimize, and streamline existing bioinformatic pipelines, especially the infrastructure facilitating the logistics of input intermediary and output data.

Phagos
Phagos

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Le poste

Descriptif du poste

To achieve our ambitious goal, we are looking for a motivated software engineer to join our dynamic team. Your work will focus on writing, reviewing, and optimizing bioinformatics scripts and pipelines, ensuring robust, efficient data processing in our bioinformatics team. If you’re ready to play a critical role in our journey and make an impact, we’d love to hear from you!

Your Responsibilities

  • Write, understand, and review Python, Bash, R, and Nextflow scripts in bioinformatics workflows

  • Review, understand and optimize, and streamline existing bioinformatic pipelines, especially the infrastructure facilitating the logistics of input intermediary and output data

  • Collaborate closely with bioinformaticians to provide scripting and technical support, refactor code according best practice standards keeping ease of maintenance in mind

  • Maintain the modular structure of our codebase


Profil recherché

Required:

  • Bachelor’s degree in Computer Science or related field.

  • Proficiency in Python, Docker, and HTML

  • Professional working proficiency in English (both writing and spoken).

Nice-to-Have (in order of priority):

  • Prior knowledge in bioinformatics

  • Able to present results with proper visualization

  • Proficiency in R

  • Familiarity with pipeline automation tools like Nextflow

  • Proficiency with PostgreSQL


Déroulement des entretiens

At Phagos we believe the recruitment process begins from the application. This is why we invite you to  take your time and thoughtfully complete our application form.

Once we select your profile, we are committed to make sure you have a positive and seamless experience !

Interview #1 with Andrew, Research Scientist in Bioinformatics.

Interview #2 with Adèle & Alex, our co-founders.

Interview #3 with 5 team members of Phagos, randomly picked for a Teamfit discussion.

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